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<art>
   <ui>1756-3305-1-31</ui>
   <ji>1756-3305</ji>
   <fm>
      <dochead>Short report</dochead>
      <bibl>
         <title>
            <p>Absence of <it>Wolbachia </it>endobacteria in the non-filariid nematodes <it>Angiostrongylus cantonensis </it>and <it>A. costaricensis</it></p>
         </title>
         <aug>
            <au id="A1">
               <snm>Foster</snm>
               <mi>M</mi>
               <fnm>Jeremy</fnm>
               <insr iid="I1"/>
               <email>foster@neb.com</email>
            </au>
            <au id="A2">
               <snm>Kumar</snm>
               <fnm>Sanjay</fnm>
               <insr iid="I1"/>
               <email>kumar@neb.com</email>
            </au>
            <au id="A3">
               <snm>Ford</snm>
               <fnm>Louise</fnm>
               <insr iid="I2"/>
               <email>lford@liverpool.ac.uk</email>
            </au>
            <au id="A4">
               <snm>Johnston</snm>
               <mi>L</mi>
               <fnm>Kelly</fnm>
               <insr iid="I2"/>
               <email>johnkel@liverpool.ac.uk</email>
            </au>
            <au id="A5">
               <snm>Ben</snm>
               <fnm>Renata</fnm>
               <insr iid="I3"/>
               <email>benrenata@gmail.com</email>
            </au>
            <au id="A6">
               <snm>Graeff-Teixeira</snm>
               <fnm>Carlos</fnm>
               <insr iid="I3"/>
               <email>graeff.teixeira@gmail.com</email>
            </au>
            <au ca="yes" id="A7">
               <snm>Taylor</snm>
               <mi>J</mi>
               <fnm>Mark</fnm>
               <insr iid="I2"/>
               <email>mark.taylor@liverpool.ac.uk</email>
            </au>
         </aug>
         <insg>
            <ins id="I1">
               <p>Parasitology Division, New England Biolabs, 240 County Road, Ipswich, MA 01938, USA</p>
            </ins>
            <ins id="I2">
               <p>Molecular and Biochemical Parasitology, Liverpool School of Tropical Medicine, Pembroke Place, Liverpool L3 5QA, UK</p>
            </ins>
            <ins id="I3">
               <p>Laborat&#243;rio de Parasitologia Molecular, Instituto de Pesquisas Biom&#233;dicas da PUCRS, Porto Alegre, Brazil</p>
            </ins>
         </insg>
         <source>Parasites &amp; Vectors</source>
         <issn>1756-3305</issn>
         <pubdate>2008</pubdate>
         <volume>1</volume>
         <issue>1</issue>
         <fpage>31</fpage>
         <url>http://www.parasitesandvectors.com/content/1/1/31</url>
         <xrefbib>
            <pubidlist>
               <pubid idtype="pmpid">18801163</pubid>
               <pubid idtype="doi">10.1186/1756-3305-1-31</pubid>
            </pubidlist>
         </xrefbib>
      </bibl>
      <history>
         <rec>
            <date>
               <day>17</day>
               <month>7</month>
               <year>2008</year>
            </date>
         </rec>
         <acc>
            <date>
               <day>18</day>
               <month>9</month>
               <year>2008</year>
            </date>
         </acc>
         <pub>
            <date>
               <day>18</day>
               <month>9</month>
               <year>2008</year>
            </date>
         </pub>
      </history>
      <cpyrt>
         <year>2008</year>
         <collab>Foster et al; licensee BioMed Central Ltd.</collab>
         <note>This is an Open Access article distributed under the terms of the Creative Commons Attribution License (<url>http://creativecommons.org/licenses/by/2.0</url>), which permits unrestricted use, distribution, and reproduction in any medium, provided the original work is properly cited.</note>
      </cpyrt>
      <abs>
         <sec>
            <st>
               <p>Abstract</p>
            </st>
            <p>The majority of filarial nematodes harbour <it>Wolbachia </it>endobacteria, including the major pathogenic species in humans, <it>Onchocerca volvulus</it>, <it>Brugia malayi </it>and <it>Wuchereria bancrofti</it>. These obligate endosymbionts have never been demonstrated unequivocally in any non-filariid nematode. However, a recent report described the detection by PCR of <it>Wolbachia </it>in the metastrongylid nematode, <it>Angiostrongylus cantonensis </it>(rat lungworm), a leading cause of eosinophilic meningitis in humans. To address the intriguing possibility of <it>Wolbachia </it>infection in nematode species distinct from the Family Onchocercidae, we used both PCR and immunohistochemistry to screen samples of <it>A. cantonensis </it>and <it>A. costaricensis </it>for the presence of this endosymbiont. We were unable to detect <it>Wolbachia </it>in either species using these methodologies. In addition, bioinformatic and phylogenetic analyses of the <it>Wolbachia </it>gene sequences reported previously from <it>A. cantonensis </it>indicate that they most likely result from contamination with DNA from arthropods and filarial nematodes. This study demonstrates the need for caution in relying solely on PCR for identification of new endosymbiont strains from invertebrate DNA samples.</p>
         </sec>
      </abs>
   </fm>
   <meta>
      <classifications>
         <classification id="endnote" subtype="user_supplied_xml" type="bmc"/>
      </classifications>
   </meta>
   <bdy>
      <sec>
         <st>
            <p>Findings</p>
         </st>
         <p><it>Wolbachia </it>endobacteria infect most species of insect and are present in other arthropod groups as well as in most filarial nematode species. Phylogenetic analyses currently indicate as many as eight distinct <it>Wolbachia </it>lineages, designated supergroups A to H, along with some other lineages whose taxonomic position remains unresolved <abbrgrp><abbr bid="B1">1</abbr><abbr bid="B2">2</abbr></abbrgrp>. Arthropod <it>Wolbachia </it>are found in all supergroups except C and D, with the majority of insect <it>Wolbachia </it>strains in supergroups A and B. <it>Wolbachia </it>from filarial nematodes are exclusively in supergroups C and D with the exception of endosymbionts from <it>Mansonella spp</it>., which are in supergroup F along with the <it>Wolbachia </it>from certain termites.</p>
         <p>The association between <it>Wolbachia </it>and filarial nematodes appears to be one of mutualism, probably of an obligatory nature <abbrgrp><abbr bid="B3">3</abbr></abbrgrp>. Elimination of the endosymbionts by antibiotic treatment disrupts embryogenesis and hence microfilarial production, disrupts growth and development, and leads to macrofilaricidal effects. <it>Wolbachia </it>are also implicated in the immunopathology of infected persons and may contribute to the inflammatory adverse events seen after standard anti-filarial chemotherapy <abbrgrp><abbr bid="B3">3</abbr></abbrgrp>. Thus, targeting the <it>Wolbachia </it>endosymbiont has emerged as an attractive new strategy for filarial disease control <abbrgrp><abbr bid="B3">3</abbr></abbrgrp>.</p>
         <p>Until recently, despite extensive investigation of diverse nematode groups, there had been no identification of <it>Wolbachia </it>in any non-filariid nematode <abbrgrp><abbr bid="B4">4</abbr><abbr bid="B5">5</abbr></abbrgrp>. However, <it>Wolbachia ftsZ</it>, <it>wsp </it>(<it>Wolbachia </it>surface protein) and 16S rDNA sequences were recently amplified by PCR from DNA preparations of the metastrongylid nematode, <it>Angiostrongylus cantonensis </it><abbrgrp><abbr bid="B6">6</abbr></abbrgrp>. Based on phylogenetic analysis of the <it>wsp </it>sequence, the apparent endosymbiont from <it>A. cantonensis </it>appeared to have a lineage distinct from the filarial <it>Wolbachia </it>(supergroups C, D or F) and was tentatively positioned in supergroup G, containing the <it>Wolbachia </it>from certain spiders such as <it>Diaea circumlita</it>. Both <it>A. cantonensis </it>and <it>A. costaricensis </it>are occasional pathogens of humans, the former a leading cause of eosinophilic meningitis in Asia and Pacific Islands while the latter produces abdominal disease in the Americas <abbrgrp><abbr bid="B7">7</abbr><abbr bid="B8">8</abbr></abbrgrp>. The unexpected detection of <it>Wolbachia </it>in <it>A. cantonensis </it>and the medical implications of targeting this endosymbiont for novel antibiotic therapies for control of eosinophilic meningitis prompted us to investigate the status of <it>Wolbachia </it>in the genus <it>Angiostrongylus </it>in more detail.</p>
         <p><it>A. cantonensis </it>was obtained from Prof. Kentaro Yoshimura and maintained as a laboratory life-cycle in the Department of Parasitology of the Akita University Medical School. <it>A. costaricensis </it>strain "Santa Rosa" has been maintained in the Laborat&#243;rio de Parasitologia Molecular, Instituto de Pesquisas Biom&#233;dicas da PUCRS since 1992 (in mice and the wild rodent <it>Oligoryzomis nigripes</it>; veronicelid slugs and <it>Biomphalaria glabrata </it>snails). Adult <it>Brugia malayi </it>(TRS labs) were used as a positive control for PCR and immunohistochemistry</p>
         <p>PCR analysis of <it>Wolbachia </it>genes from both <it>A. cantonensis </it>and <it>A. costaricensis </it>adult worms showed no evidence that either species harbours <it>Wolbachia </it>endosymbionts. Genomic DNA from individual adult female <it>A. cantonensis </it>and <it>A. costaricensis</it>, which had been stored in 80% ethanol, was isolated (QiaAmp<sup>&#174; </sup>DNA mini kit, Qiagen) and analysed for <it>Wolbachia </it>by PCR as previously described <abbrgrp><abbr bid="B6">6</abbr></abbrgrp> with modifications. PCR was carried out on a iCycler thermocycler (Bio-Rad) using the following conditions: 95&#176;C for 4 min, followed by 40 cycles of 94&#176;C for 15 s, 48&#176;C for 30 s, 72&#176;C for 2 min, then 72&#176;C for 10 min, using primer pairs widely used for detection of <it>Wolbachia </it>from diverse hosts, and previously used on DNA from <it>A. cantonensis </it><abbrgrp><abbr bid="B6">6</abbr></abbrgrp>. The following primers were used for amplification of <it>Wolbachia </it>gene sequences: <it>wsp </it>(wsp81F; 5'-TGG TCC AAT AAG TGA TGA AGA AAC-3' and wsp691R; 5'-AAA AAT TAA ACG CTA CTC CA-3'); <it>ftsZ </it>(ftsZ357F; 5'-CAA AAA TAT GTG GAT ACG CTC ATT GT-3' and ftsZ788R; 5'-GTA GCA CCA AAT ATT ATA TTT GCA TTT TC-3'); and 16S rRNA (16SwolbF; 5'-GAA GAT AAT GAC GGT ACT CAC-3' and 16SwolbR3; 5'-GTC ACT GAT CCC ACT TTA AAT AAC-3'). PCR reactions were performed in 25 &#956;l containing 1 &#956;l gDNA, 0.3 &#956;M of each primer, 0.2 mM dNTPs, 1.5&#8211;3.0 mM MgCl<sub>2 </sub>and 0.625 U of Taq polymerase (New England Biolabs [NEB]) in 1&#215; reaction buffer (NEB). Positive PCR amplification was shown using DNA isolated from individual adult female <it>B. malayi</it>, which are known to contain <it>Wolbachia</it>, thus demonstrating that the primers and conditions were optimal for <it>Wolbachia </it>detection. All DNA samples produced nematode specific gene products. <it>Angiostrongylus </it>18S rRNA, based on GenBank sequences from <it>A. cantonensis </it>and <it>A. costaricensis </it>([GenBank:<ext-link ext-link-id="AY295804" ext-link-type="gen">AY295804</ext-link>] and [GenBank:<ext-link ext-link-id="EF514913" ext-link-type="gen">EF514913</ext-link>], respectively) was amplified with primers Ac18S 30F; 5'-AAG TGA AAC TGC GAA CGG CT-3' and Ac18S 830R; 5'-TCA CCT CTC GCG CAG GGA TA-3', while <it>B. malayi gst </it>was amplified as previously described <abbrgrp><abbr bid="B9">9</abbr></abbrgrp> using GST 1377; 5'-TGC TCG CAA ACA TAG TAA TAG T-3' and GST 1632; 5'-ATC ACG GAC GCC TTC ACA G-3', indicating that there was DNA at sufficient concentrations for detection by standard one-round PCR.</p>
         <p>In order to detect <it>Wolbachia </it>by immunohistochemistry, <it>A. cantonensis </it>and <it>A. costaricensis </it>worms were fixed in 80% ethanol and embedded in paraffin blocks. Sections were stained using affinity purified anti-<it>Wolbachia </it>peptidoglycan-associated lipoprotein (WoLP) antibodies and rabbit polyclonal anti-sera raised to <it>Wolbachia </it>surface protein (WSP) and visualized using the UltraVision ONE detection system (Lab Vision, ThermoFisher Scientific) using haematoxylin as a counterstain. In contrast to the positive staining observed in sections of <it>B. malayi</it>, both <it>Angiostrongylus </it>species were found to be negative with each of the <it>Wolbachia</it>-specific antibodies or antisera. It should be noted that both of these reagents are able to detect <it>Wolbachia </it>in species as diverse as filarial nematodes and the mosquito <it>Aedes albopictus </it>[<abbrgrp><abbr bid="B9">9</abbr><abbr bid="B10">10</abbr><abbr bid="B11">11</abbr></abbrgrp>, M. Taylor, unpublished data], indicating that a lack of cross-reactivity to <it>Wolbachia </it>found in <it>Angiostrongylus </it>is unlikely.</p>
         <p>Because we were unable to reproduce the detection of <it>Wolbachia </it>in <it>Angiostrongylus spp </it>by PCR or immunohistochemistry, we analyzed in detail the sequences deposited in the GenBank database as part of the earlier report <abbrgrp><abbr bid="B6">6</abbr></abbrgrp>. Comparison of the <it>wsp </it>nucleotide sequence [GenBank:<ext-link ext-link-id="AY508980" ext-link-type="gen">AY508980</ext-link>] to the non-redundant nucleotide database (nr) using BLASTN revealed good identity (97%) to the <it>wsp </it>sequence [GenBank:<ext-link ext-link-id="AY486092" ext-link-type="gen">AY486092</ext-link>] from the putative supergroup G <it>Wolbachia </it>from the spider, <it>D. circumlita </it>c2, as described previously <abbrgrp><abbr bid="B6">6</abbr></abbrgrp>. However, the best identity (99%) was to <it>wsp </it>from the <it>Wolbachia </it>of the mosquito, <it>Malaya genurostris </it>[GenBank:<ext-link ext-link-id="AY462865" ext-link-type="gen">AY462865</ext-link>]. <it>Wolbachia </it>multilocus sequence typing (MLST) has shown that phylogenetic inference based upon <it>wsp </it>sequences yields spurious lineages due to the high levels of intragenic recombination in this gene <abbrgrp><abbr bid="B1">1</abbr></abbrgrp>. MLST of the <it>Wolbachia </it>of the spider, <it>D. circumlita </it>c2, indicates that this endosymbiont is more correctly a member of supergroup A <abbrgrp><abbr bid="B1">1</abbr></abbrgrp>, and so too presumably is the <it>Wolbachia </it>from the mosquito, <it>M. genurostris</it>.</p>
         <p>We performed similar nucleotide comparisons of the 16S [GenBank:<ext-link ext-link-id="AY652762" ext-link-type="gen">AY652762</ext-link>] and <it>ftsZ </it>[GenBank:<ext-link ext-link-id="DQ159068" ext-link-type="gen">DQ159068</ext-link>] sequences attributed to <it>Wolbachia </it>from <it>A. cantonensis </it>and constructed phylogenetic trees for each. <it>Wolbachia </it>sequences used for multiple alignments and phylogenetic tree construction are as follows, with the first GenBank sequence for each invertebrate host organism corresponding to 16S and the second to <it>ftsZ</it>: <it><ul>B</ul>rugia <ul>mal</ul>ayi </it>[GenBank:<ext-link ext-link-id="AJ010275" ext-link-type="gen">AJ010275</ext-link>], [GenBank:<ext-link ext-link-id="AJ010269" ext-link-type="gen">AJ010269</ext-link>]; <it><ul>B</ul>. <ul>pah</ul>angi </it>[GenBank:<ext-link ext-link-id="AJ012646" ext-link-type="gen">AJ012646</ext-link>], [GenBank:<ext-link ext-link-id="AJ010270" ext-link-type="gen">AJ010270</ext-link>]; <it><ul>L</ul>itomosoides <ul>sig</ul>modontis </it>[GenBank:<ext-link ext-link-id="AF069068" ext-link-type="gen">AF069068</ext-link>], [GenBank:<ext-link ext-link-id="AJ010271" ext-link-type="gen">AJ010271</ext-link>]; <it><ul>O</ul>nchocerca <ul>vol</ul>vulus </it>[GenBank:<ext-link ext-link-id="CU062464" ext-link-type="gen">CU062464</ext-link>], GenBank:<ext-link ext-link-id="AJ276501" ext-link-type="gen">AJ276501</ext-link>]; <it><ul>O</ul>. <ul>gut</ul>turosa </it>[GenBank:<ext-link ext-link-id="AJ276498" ext-link-type="gen">AJ276498</ext-link>], [GenBank:<ext-link ext-link-id="AJ010266" ext-link-type="gen">AJ010266</ext-link>]; <it><ul>D</ul>irofilaria <ul>imm</ul>itis </it>[Genbank:<ext-link ext-link-id="Z49261" ext-link-type="gen">Z49261</ext-link>], [GenBank:<ext-link ext-link-id="AJ010272" ext-link-type="gen">AJ010272</ext-link>]; <it><ul>D</ul>rosophila <ul>mel</ul>anogaster </it>[GenBank: <ext-link ext-link-id="NC_002978.6" ext-link-type="gen">NC_002978.6</ext-link>; genome coordinates: 1167943&#8211;1169389], [GenBank:<ext-link ext-link-id="U28189" ext-link-type="gen">U28189</ext-link>]; <it><ul>D</ul>. <ul>sim</ul>ulans <ul>w</ul></it><ul>Ri</ul>verside [GenBank:<ext-link ext-link-id="DQ412085" ext-link-type="gen">DQ412085</ext-link>], [GenBank:<ext-link ext-link-id="U28178" ext-link-type="gen">U28178</ext-link>]; <it><ul>T</ul>richogramma <ul>cor</ul>dubensis </it>[GenBank:<ext-link ext-link-id="L02883" ext-link-type="gen">L02883</ext-link>], [GenBank:<ext-link ext-link-id="U28200" ext-link-type="gen">U28200</ext-link>]; <it><ul>C</ul>ulex <ul>pip</ul>iens </it>[Genbank:<ext-link ext-link-id="U23709" ext-link-type="gen">U23709</ext-link>], [GenBank:<ext-link ext-link-id="U28209" ext-link-type="gen">U28209</ext-link>]; <it><ul>F</ul>olsomia <ul>can</ul>dida </it>[GenBank:<ext-link ext-link-id="AF179630" ext-link-type="gen">AF179630</ext-link>], [GenBank:<ext-link ext-link-id="AJ344216" ext-link-type="gen">AJ344216</ext-link>]; <it><ul>K</ul>alotermes <ul>fla</ul>vicollis </it>[GenBank:<ext-link ext-link-id="Y11377" ext-link-type="gen">Y11377</ext-link>], [GenBank:<ext-link ext-link-id="AJ292345" ext-link-type="gen">AJ292345</ext-link>], <it><ul>M</ul>ansonella <ul>per</ul>stans </it>16S [GenBank:<ext-link ext-link-id="AY278355" ext-link-type="gen">AY278355</ext-link>]; <it><ul>M</ul>ansonella <ul>sp</ul></it>. <it>ftsZ </it>[GenBank:<ext-link ext-link-id="AJ628414" ext-link-type="gen">AJ628414</ext-link>]. The underlined characters for each host species represent the abbreviations shown in the trees. The 16S sequence attributed to <it>Wolbachia </it>from <it>A. cantonensis </it>had highest nucleotide identity (99%) to <it>Wolbachia </it>16S from <it>D. immitis </it>[GenBank:<ext-link ext-link-id="Z49261" ext-link-type="gen">Z49261</ext-link>]. This identity was better than that between <it>Wolbachia </it>16S sequences from sister species within the genus <it>Dirofilaria</it>, namely <it>D. immitis </it>and <it>D. repens </it>(98%). An equal match was detected for <it>Wolbachia </it>apparently from an engorged dog tick, <it>Rhipicephalus sanguineus </it>[GenBank:<ext-link ext-link-id="AF304445" ext-link-type="gen">AF304445</ext-link>], but since this tick lacks <it>Wolbachia </it><abbrgrp><abbr bid="B12">12</abbr></abbrgrp>, we propose that this <it>Wolbachia </it>sequence derived from <it>D. immitis </it>acquired during a blood feed on a heartworm-infected dog. The 16S phylogenetic tree resolved supergroups A to F and confirmed the near identity of the sequence amplified from <it>A. cantonensis </it>to the <it>Wolbachia </it>16S from <it>D. immitis </it>(Figure <figr fid="F1">1a</figr>; see additional file <supplr sid="S1">1</supplr>: <it>Wolbachia </it>16S multiple sequence alignment &#8211; <it>A. cantonensis</it>). The available 16S sequences for <it>Wolbachia </it>from <it>A. cantonensis </it>and from <it>D. circumlita </it>are partial gene sequences and have very little overlap with each other. Therefore, we were unable to include <it>D. circumlita Wolbachia </it>16S in the same alignment and phylogenetic tree as the 16S reported from <it>Wolbachia </it>from <it>A. cantonensis</it>. However, a separate alignment and tree using 16S fragments corresponding to that from <it>Wolbachia </it>of <it>D. circumlita </it>showed that this sequence is quite distinct from the <it>D. immitis Wolbachia </it>16S and clusters with sequences from <it>Wolbachia </it>of arthropods (Figure <figr fid="F1">1b</figr>; see additional file <supplr sid="S2">2</supplr>: <it>Wolbachia </it>16S multiple sequence alignment &#8211; <it>D. circumlita</it>), as expected based on recent <it>Wolbachia </it>MLST <abbrgrp><abbr bid="B1">1</abbr></abbrgrp>. Therefore, while the <it>wsp </it>gene reported for <it>Wolbachia </it>from <it>A. cantonensis </it>has high identity to sequences from the endosymbionts of the arthropods, <it>M. genurostris </it>and <it>D. circumlita</it>, the 16S sequence is nearly identical to <it>Wolbachia </it>16S from filarial nematodes, notably <it>D. immitis </it>(supergroup C). The results of our analyses of <it>ftsZ </it>were very similar to those obtained for 16S. We observed 99% identity to the <it>ftsZ</it> reported from the <it>Wolbachia </it>from <it>D. immitis </it>[GenBank:<ext-link ext-link-id="AJ010272" ext-link-type="gen">AJ010272</ext-link>]. The level of identity between these two sequences also exceeded that between the <it>Wolbachia ftsZ </it>sequences from the sister species <it>D. immitis </it>and <it>D. repens </it>(92%). A phylogenetic analysis of <it>ftsZ </it>sequences representing <it>Wolbachia </it>supergroups A to F (Figure <figr fid="F1">1c</figr>; see additional file <supplr sid="S3">3</supplr>: <it>Wolbachia ftsZ</it> multiple sequence alignment) also resolved these six groups and confirmed the high similarity of the sequence reported for <it>Wolbachia </it>from <it>A. cantonensis </it>and that from <it>D. immitis</it>.</p>
         <suppl id="S1">
            <title>
               <p>Additional file 1</p>
            </title>
            <text>
               <p><it>Wolbachia </it>16S multiple sequence alignment &#8211; <it>A. cantonensis</it>. A multiple sequence alignment of the 16S sequence attributed to <it>Wolbachia </it>from <it>A. cantonensis </it>and corresponding 16S fragments from <it>Wolbachia </it>from diverse arthropod and nematode hosts.</p>
            </text>
            <file name="1756-3305-1-31-S1.pdf">
               <p>Click here for file</p>
            </file>
         </suppl>
         <suppl id="S2">
            <title>
               <p>Additional file 2</p>
            </title>
            <text>
               <p><it>Wolbachia </it>16S multiple sequence alignment &#8211; <it>D. circumlita</it>. A multiple sequence alignment of the 16S sequence of <it>Wolbachia </it>from <it>D. circumlita </it>and corresponding 16S fragments from <it>Wolbachia </it>from diverse arthropod and nematode hosts.</p>
            </text>
            <file name="1756-3305-1-31-S2.pdf">
               <p>Click here for file</p>
            </file>
         </suppl>
         <suppl id="S3">
            <title>
               <p>Additional file 3</p>
            </title>
            <text>
               <p><it>Wolbachia ftsZ </it>multiple sequence alignment. A multiple sequence alignment of the <it>ftsZ </it>sequence attributed to <it>Wolbachia </it>from <it>A. cantonensis </it>and corresponding <it>ftsZ </it>fragments from <it>Wolbachia </it>from diverse arthropod and nematode hosts.</p>
            </text>
            <file name="1756-3305-1-31-S3.pdf">
               <p>Click here for file</p>
            </file>
         </suppl>
         <fig id="F1">
            <title>
               <p>Figure 1</p>
            </title>
            <caption>
               <p>Minimum evolution trees based on alignments of <b> A</b>) the <it>Wolbachia </it>16S (770 nucleotides) reported from <it><ul>A</ul>. <ul>can</ul>tonensis </it>[GenBank:<ext-link ext-link-id="AY652762" ext-link-type="gen">AY652762</ext-link>], <b>B</b>) the <it>Wolbachia </it>16S (639 nucleotides) of <it><ul>D</ul>. <ul>cir</ul>cumlita </it>c2 [GenBank:<ext-link ext-link-id="AY486072" ext-link-type="gen">AY486072</ext-link>], and <b>C</b>) the <it>Wolbachia ftsZ </it>(431 nucleotides) reported from <it><ul>A</ul>. <ul>can</ul>tonensis </it>[GenBank:<ext-link ext-link-id="DQ159068" ext-link-type="gen">DQ159068</ext-link>]</p>
            </caption>
            <text>
               <p><b>Minimum evolution trees based on alignments of A) the </b><it><b>Wolbachia</b></it><b>16S (770 nucleotides) reported from</b><it><ul><b> A</b></ul>. <ul><b>can</b></ul><b>tonensis</b></it><b>[GenBank:</b><ext-link ext-link-id="AY652762" ext-link-type="gen">AY652762</ext-link>], <b>B) the <it>Wolbachia </it>16S (639 nucleotides) of <it><ul>D</ul>. <ul>cir</ul>cumlita </it>c2 [GenBank:</b><ext-link ext-link-id="AY486072" ext-link-type="gen">AY486072</ext-link>]<b>, and C) the <it>Wolbachia ftsZ </it>(431 nucleotides) reported from <it><ul>A</ul>. <ul>can</ul>tonensis </it>[GenBank:</b><ext-link ext-link-id="DQ159068" ext-link-type="gen">DQ159068</ext-link><b> ]</b>. Sequences were aligned using ClustalX version 2.0.7 <abbrgrp><abbr bid="B14">14</abbr></abbrgrp> using default parameters for slow/accurate alignment [Gap Opening:10, Gap Extend: 0.1, IUB DNA weight matrix]. After alignment, sequences were manually trimmed to the endpoints of the 16S sequences of the <it>Wolbachia </it>from <it>A. cantonensis </it>(see additional file <supplr sid="S1">1</supplr>: <it>Wolbachia </it>16S multiple sequence alignment &#8211; <it>A. cantonensis</it>) and <it>D. circumlita </it>(see additional file <supplr sid="S2">2</supplr>: <it>Wolbachia </it>16S multiple sequence alignment &#8211; <it>D. circumlita</it>), and to the endpoints of the <it>ftsZ </it>sequence of the <it>Wolbachia </it>from <it>A. cantonensis </it>(see additional file <supplr sid="S3">3</supplr>: <it>Wolbachia </it>ftsZ multiple sequence alignment). Phylogenetic trees were calculated using the Minimum Evolution method in MEGA4 <abbrgrp><abbr bid="B15">15</abbr></abbrgrp>. The percentage of replicate trees in which the associated taxa clustered together in the bootstrap test (1000 replicates) is shown next to the branches. Evolutionary distances were computed using the Maximum Composite Likelihood. The Minimum Evolution tree was searched using the Close-Neighbor-Interchange (CNI) algorithm at a search level of 1. The Neighbor-joining algorithm was used to generate the initial tree. All positions containing gaps and missing data were eliminated from the dataset (Complete deletion option).</p>
            </text>
            <graphic file="1756-3305-1-31-1"/>
         </fig>
         <p>In conclusion, our inability to detect <it>Wolbachia </it>in two different species of <it>Angiostrongylus </it>by PCR or immunohistochemistry argues against the presence of this endosymbiont in these metastrongylid nematodes. Lateral gene transfers from <it>Wolbachia </it>to invertebrates are common <abbrgrp><abbr bid="B13">13</abbr></abbrgrp>. Such a phenomenon could conceivably have resulted in the presence of <it>Wolbachia </it>fragments in the <it>A. cantonensis </it>genome, but since we were unable to detect <it>Wolbachia </it>sequences using the same PCR primers as were used in the earlier report <abbrgrp><abbr bid="B6">6</abbr></abbrgrp>, this possibility seems most unlikely. Instead, we suspect contamination of the DNA samples or PCR reactions with <it>Wolbachia </it>DNA from the mosquito, <it>M. genurostris </it>in the case of <it>wsp </it>and the filarial nematode, <it>D. immitis</it>, in the case of both <it>ftsZ </it>and 16S. This seems very plausible since the nucleotide identity is 99% in all cases. In support of this conclusion, we note that the <it>wsp </it>sequence of the <it>M. genurostris </it>endosymbiont was deposited in the GenBank database by the same authors of the recent report on <it>Wolbachia </it>in <it>A. cantonensis</it>, and that they carry out research on <it>D. immitis</it>. We cannot rule out the possibility that <it>A. cantonensis </it>from Taiwan contain <it>Wolbachia </it>while the worms we analyzed from Japan do not. However, the high identities of the reported sequences to those from arthropod <it>Wolbachia </it>(supergroup A) on the one hand, but to the <it>Wolbachia </it>from the nematode, <it>D. immitis </it>(supergroup C), on the other, evoke either a double <it>Wolbachia </it>infection, a phenomenon never observed in nematode-<it>Wolbachia </it>symbioses, or a highly divergent <it>Wolbachia </it>lineage unlike any reported thus far. The most straightforward conclusion from our analysis is that <it>Angiostrongylus sp</it>. do not contain <it>Wolbachia</it>.</p>
      </sec>
      <sec>
         <st>
            <p>Competing interests</p>
         </st>
         <p>The authors declare that they have no competing interests.</p>
      </sec>
      <sec>
         <st>
            <p>Authors' contributions</p>
         </st>
         <p>MT and JF wrote the paper. JF and SK performed bioinformatic analyses and constructed the multiple sequence alignments and phylogenetic trees. LF carried out PCR analyses and KJ immunohistochemistry and both contributed to writing the paper. RB and C G-T performed the initial PCR analysis and provided parasite material. MT conceived and directed the study. All authors read and approved the final manuscript.</p>
      </sec>
   </bdy>
   <bm>
      <ack>
         <sec>
            <st>
               <p>Acknowledgements</p>
            </st>
            <p>We thank the Bill and Melinda Gates Foundation for support of the A-WOL consortium (MT, LF, KJ &amp; SK) and New England Biolabs for financial support (JF, SK).</p>
         </sec>
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                  <snm>Dudley</snm>
                  <fnm>J</fnm>
               </au>
               <au>
                  <snm>Nei</snm>
                  <fnm>M</fnm>
               </au>
               <au>
                  <snm>Kumar</snm>
                  <fnm>S</fnm>
               </au>
            </aug>
            <source>Mol Biol Evol</source>
            <pubdate>2007</pubdate>
            <volume>24</volume>
            <fpage>1596</fpage>
            <lpage>1599</lpage>
            <xrefbib>
               <pubidlist>
                  <pubid idtype="doi">10.1093/molbev/msm092</pubid>
                  <pubid idtype="pmpid" link="fulltext">17488738</pubid>
               </pubidlist>
            </xrefbib>
         </bibl>
      </refgrp>
   </bm>
</art>

