Research
Transcriptome analysis of Taenia solium cysticerci using Open Reading Frame ESTs (ORESTES)
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* Corresponding author: Edmundo C Grisard grisard@ccb.ufsc.br
1 Laboratório de Neurociências (LIM27), Departamento e Instituto de Psiquiatria, Faculdade de Medicina da Universidade de São Paulo, Rua Dr. Ovídio Pires de Campos 785, CEP 05403-010, São Paulo, SP, Brazil
2 Laboratórios de Protozoologia e de Bioinformática, Departamento de Microbiologia, Imunologia e Parasitologia, Universidade Federal de Santa Catarina (UFSC), Caixa postal 476, CEP 88040-970, Florianópolis, SC, Brazil
3 Laboratório de Biologia Molecular e Bioinformática, Área das Ciências Biológicas e da Saúde, Universidade do Oeste de Santa Catarina (UNOESC), CEP 89600-000, Joaçaba, SC, Brazil
4 Departamento de Ciências Básicas, Faculdade de Zootecnia e Engenharia de Alimentos. Universidade de São Paulo (USP), Av. Duque de Caxias Norte, 225, Centro, CEP 13630-000, Pirassununga, SP, Brazil
5 Departamento de Biologia Molecular e Biotecnologia and Centro de Biotecnologia, Universidade Federal do Rio Grande do Sul (UFRGS), Av. Bento Gonçalves 9500, Prédio 4342131, Setor IV, Campus do Vale, CEP 91501-970, Porto Alegre, RS, Brazil
6 Biomedical Research Centre, School of Medicine, Health Policy and Practice, University of East Anglia (UEA), NR4 7TJ, Norwich, Norfolk, UK
7 Instituto Oswaldo Cruz, Fundação Oswaldo Cruz (FIOCRUZ), Pavilhão Leônidas Deane, Avenida Brasil 4365, CEP 21040-360, Rio de Janeiro, RJ, Brazil
8 Department of Genitourinary Medical Oncology, MD Anderson Cancer Center, 1515 Holcombe Blvd., Unit 1374 Medical Center, 77030 Houston, USA
Parasites & Vectors 2009, 2:35 doi:10.1186/1756-3305-2-35
Published: 31 July 2009Additional files
Additional file 1:
Table S1. List of Taenia solium ESTs and their GenBank accession numbers.
Format: XLS Size: 125KB Download file
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Additional file 2:
Table S3. Distribution of the Taenia solium EST according to their characteristics and similarity analysis.
Format: XLS Size: 123KB Download file
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Additional file 3:
Table S4. Number of Taenia solium ORESTES according to their annotation as coding sequences (CDS).
Format: XLS Size: 23KB Download file
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Additional file 4:
Table S5. Distribution of Taenia solium EST hits according to the Gene Onthology (GO) classification.
Format: XLS Size: 48KB Download file
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Additional file 5:
Table S6. Taenia solium ESTs with predicted extra-cellular sub-localization by Wolf-PSORT.
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Additional file 6:
Table S7. Number of Taenia solium EST eliciting hits with the CDD database.
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Additional file 7:
Table S8. Number of Taenia solium EST eliciting hits with the COG database.
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Additional file 8:
Table S9. Number of Taenia solium EST eliciting hits with the KOG database.
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Additional file 9:
Picture S1. Distribution of the most frequent Eukaryotic Orthologous Groups categories observed for the Taenia solium sequences.
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Additional file 10:
Table S10. List of Taenia solium EST with similarity to the parasite genome project sequences.
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Additional file 11:
Table S11. List of interesting genes found in Taenia solium ESTs.
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Additional file 12:
Table S2. List of cDNA mini-libraries, primers used for generation of the Taenia solium EST profiles and the number of sequences obtained in each library.
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